STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_10032Hypothetical protein. (162 aa)    
Predicted Functional Partners:
ATO7_10047
Hypothetical protein.
 
   
 0.955
ATO7_10042
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.954
ATO7_10027
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
  
 0.951
ATO7_10037
Von Willebrand factor A; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
 
     0.951
ATO7_10022
COG0714 MoxR-like ATPases.
 
 
 0.902
ATO7_10052
COG0695 Glutaredoxin and related proteins.
       0.773
ATO7_07200
Group 1 glycosyl transferase; COG3551 Uncharacterized protein conserved in bacteria.
  
 0.654
ATO7_01840
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 
  0.628
ATO7_13663
Flavodoxin reductase-like protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 
  0.628
ATO7_14888
Oxidoreductase FAD-binding domain-containing protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
   
 
  0.628
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.