STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_11108COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. (263 aa)    
Predicted Functional Partners:
ATO7_11103
Hypothetical protein.
 
     0.955
ATO7_11113
Hypothetical protein.
       0.773
ATO7_11118
Hypothetical protein; COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase.
       0.773
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.628
motB
COG1360 Flagellar motor protein.
   
 0.625
tolB
Translocation protein TolB; COG0823 Periplasmic component of the Tol biopolymer transport system.
  
 0.463
ATO7_03995
COG3562 Capsule polysaccharide export protein.
  
     0.456
ATO7_00710
Hypothetical protein.
   
  0.446
tolB-2
Tol-pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
  0.446
ATO7_11123
TonB-dependent receptor plug; COG4206 Outer membrane cobalamin receptor protein.
       0.415
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.