STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_11188COG1680 Beta-lactamase class C and other penicillin binding proteins. (423 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
     
 0.707
ATO7_10052
COG0695 Glutaredoxin and related proteins.
  
     0.682
ATO7_07502
Hypothetical protein; COG3687 Predicted metal-dependent hydrolase.
  
     0.595
ATO7_08792
Acyltransferase, WS/DGAT/MGAT.
  
  
  0.544
ATO7_12368
Acyltransferase, WS/DGAT/MGAT subfamily protein; COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase.
 
     0.541
ATO7_10812
Acyltransferase.
  
  
  0.519
ATO7_00110
COG3687 Predicted metal-dependent hydrolase.
  
     0.513
ATO7_02715
Hypothetical protein.
  
  
  0.513
ATO7_00160
Hypothetical protein.
  
     0.506
ATO7_07427
COG2124 Cytochrome P450.
  
     0.502
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.