STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_11313COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1. (259 aa)    
Predicted Functional Partners:
ATO7_11303
COG0500 SAM-dependent methyltransferases.
       0.773
ATO7_11308
Hypothetical protein.
       0.773
ATO7_02365
Putative quinoprotein ethanol dehydrogenase; COG4993 Glucose dehydrogenase.
   
 
  0.581
ATO7_11318
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
    
  0.570
ATO7_09157
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
   
 
 0.493
gltD
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
     
 0.484
ATO7_11328
Putative TonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.458
ATO7_13663
Flavodoxin reductase-like protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
  
  0.455
ATO7_11323
COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.428
ATO7_06650
Electron-transferring-flavoprotein dehydrogenase; Accepts electrons from ETF and reduces ubiquinone.
 
   
 0.421
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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