STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_11433COG1629 Outer membrane receptor proteins, mostly Fe transport. (723 aa)    
Predicted Functional Partners:
ATO7_04205
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.702
ATO7_11353
TonB-dependent outer-membrane transporter; COG4206 Outer membrane cobalamin receptor protein.
  
 
  0.701
ATO7_00020
Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.699
ATO7_11443
Hypothetical protein; COG3182 Uncharacterized iron-regulated membrane protein.
 
     0.693
ATO7_11193
SH3 type 3 domain-containing protein.
  
     0.691
ATO7_08782
PHP domain-containing protein.
  
     0.680
ATO7_13433
TonB2 protein; COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
   0.672
ATO7_06365
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.637
ATO7_10002
COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.628
ATO7_11328
Putative TonB-dependent receptor; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.627
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.