STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_12313Peroxidase; COG0450 Peroxiredoxin. (209 aa)    
Predicted Functional Partners:
ATO7_01390
Redoxin domain-containing protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.855
ATO7_01360
COG0492 Thioredoxin reductase.
  
 
 0.830
ATO7_02940
Thioredoxin/glutaredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.763
ATO7_06105
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.763
ATO7_08637
Membrane protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.763
ATO7_09847
Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.763
ATO7_13373
Protein thiol/disulfide oxidoreductase DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 0.763
hflX
GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
 
      0.756
ATO7_06595
COG3634 Alkyl hydroperoxide reductase, large subunit.
  
  
 0.695
gltB
COG0067 Glutamate synthase domain 1.
    
 
 0.567
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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