STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_13688Hypothetical protein. (356 aa)    
Predicted Functional Partners:
ATO7_13683
Choline/carnitine/betaine transporter family protein; COG1292 Choline-glycine betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.776
ATO7_13678
Hypothetical protein; COG4798 Predicted methyltransferase.
       0.601
ATO7_13693
Hypothetical protein.
       0.532
ATO7_13698
Hypothetical protein; COG0628 Predicted permease.
       0.532
ATO7_13703
Hypothetical protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
       0.532
ATO7_13708
Peptidase C26; COG2071 Predicted glutamine amidotransferases.
       0.532
ATO7_13713
COG1238 Predicted membrane protein.
       0.532
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.