STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_14438Hypothetical protein; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family. (457 aa)    
Predicted Functional Partners:
ATO7_13608
Peptidase S8 family protein; COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
 
  
0.664
ATO7_14418
Hypothetical protein.
 
 
  0.596
ATO7_05875
Peptidase M36, fungalysin.
  
  0.495
ATO7_10938
Fibronectin type III domain-containing protein.
  
  0.492
ATO7_05600
PKD domain-containing protein; COG3979 Uncharacterized protein contain chitin-binding domain type 3.
  
     0.439
ATO7_14433
TonB-dependent receptor plug; COG1629 Outer membrane receptor proteins, mostly Fe transport.
       0.430
ATO7_02775
Cartilage oligomeric matrix protein.
 
 
  0.427
ATO7_10497
aculeacin-A acylase; COG2366 Protein related to penicillin acylase.
  
     0.426
ATO7_08667
aculeacin-A acylase; COG2366 Protein related to penicillin acylase.
  
     0.414
ATO7_01950
PKD domain containing protein.
  
 
 0.403
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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