STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_15093Putative Acyl-CoA N-acyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins. (229 aa)    
Predicted Functional Partners:
ATO7_07322
Carbamoyl-phosphate synthase L chain ATP-binding protein.
    
  0.774
ATO7_15088
Hypothetical protein; COG1561 Uncharacterized stress-induced protein.
 
     0.758
gltB
COG0067 Glutamate synthase domain 1.
   
 
 0.754
ATO7_00360
COG1605 Chorismate mutase.
    
  0.734
ATO7_04310
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.680
ATO7_15098
Hypothetical protein.
       0.584
ATO7_08797
COG0518 GMP synthase - Glutamine amidotransferase domain.
 
      0.571
ATO7_03310
COG0860 N-acetylmuramoyl-L-alanine amidase.
 
      0.535
ATO7_11648
Amidohydrolase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
  
 
  0.491
ATO7_15083
COG0631 Serine/threonine protein phosphatase.
       0.485
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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