STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_15203Cytochrome oxidase assembly protein, Sco1/SenC family. (195 aa)    
Predicted Functional Partners:
ATO7_15198
Hypothetical protein.
 
  
 0.959
ATO7_15208
Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
 
 
 0.939
ATO7_15173
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 
 0.891
ATO7_15193
Hypothetical protein.
 
     0.884
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.837
ATO7_15183
COG3175 Cytochrome oxidase assembly factor.
 
 
 0.730
ATO7_15188
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
  
 0.724
ATO7_02395
Hypothetical protein.
 
    0.677
ATO7_05965
COG2863 Cytochrome c553.
 
     0.667
ATO7_11398
Ubiquinol oxidase, subunit II; COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
  
 
 0.645
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.