STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_15777A/G-specific adenine glycosylase; COG2982 Uncharacterized protein involved in outer membrane biogenesis. (793 aa)    
Predicted Functional Partners:
ATO7_15787
A/G-specific adenine glycosylase-like protein; Adenine glycosylase active on G-A mispairs.
  
    0.820
ATO7_15792
Oxidative damage protection protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.
       0.818
ATO7_15782
Cyclase/dehydrase.
       0.789
ATO7_07887
Hypothetical protein.
   
    0.530
ATO7_06900
HemY domain-containing protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
 
     0.496
ATO7_06755
COG2911 Uncharacterized protein conserved in bacteria.
  
   
 0.452
ATO7_06905
Hypothetical protein; COG2959 Uncharacterized enzyme of heme biosynthesis.
  
     0.448
ATO7_15797
Hypothetical protein.
       0.447
mltF
Membrane-bound lytic transglycosylase F; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.
  
     0.419
rsmJ
SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA.
 
     0.413
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
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