STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATO7_15872COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis. (681 aa)    
Predicted Functional Partners:
msrB
Methionine sulfoxide reductase B; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
   
 
 0.977
ATO7_10102
Protein-disulfide reductase; COG4232 Thiol:disulfide interchange protein.
      0.890
ATO7_02510
Disulfide bond isomerase, DsbC/G-like protein; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
 
 0.846
ATO7_06105
Hypothetical protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.690
ATO7_08637
Membrane protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.690
ATO7_09847
Redoxin domain-containing protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.690
ATO7_13373
Protein thiol/disulfide oxidoreductase DsbE; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.690
ATO7_02940
Thioredoxin/glutaredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
 
 0.613
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
  
    0.584
ATO7_04860
Thioredoxin; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.
   
 
 0.544
Your Current Organism:
Oceanococcus atlanticus
NCBI taxonomy Id: 1317117
Other names: CGMCC 1.12317, LMG 27155, LMG:27155, MCCC 1A09384, Maricoccus atlantica, O. atlanticus, Oceanococcus atlanticus Li et al. 2014, Thioalkalivibrio sp. 22II-S10r2, strain 22II-S10r2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.