STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNG94795.1Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)    
Predicted Functional Partners:
KNG94796.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.975
KNG94794.1
Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.828
KNG93997.1
ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.821
KNG93996.1
mRNA 3'-end processing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.805
KNG95666.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.698
KNG93686.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.454
Your Current Organism:
Pseudaestuariivita atlantica
NCBI taxonomy Id: 1317121
Other names: Aestuariivita atlantica, Aestuariivita atlantica Li et al. 2015, Aestuariivita sp. 22II-S11-z3, Aestuariivita sp. MCCC 1A09432, KCTC 42276, MCCC 1A09432, P. atlantica, strain 22II-S11-z3
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.