STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNG94424.1Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology. (148 aa)    
Predicted Functional Partners:
KNG94046.1
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
 
     0.823
KNG93450.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.487
KNG94044.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
KNG94045.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.483
KNG93187.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.477
KNG92931.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.468
KNG93477.1
Nucleotide sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.464
KNG92344.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.461
KNG93911.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.458
KNG93354.1
Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.458
Your Current Organism:
Pseudaestuariivita atlantica
NCBI taxonomy Id: 1317121
Other names: Aestuariivita atlantica, Aestuariivita atlantica Li et al. 2015, Aestuariivita sp. 22II-S11-z3, Aestuariivita sp. MCCC 1A09432, KCTC 42276, MCCC 1A09432, P. atlantica, strain 22II-S11-z3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.