STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNG94208.1Drug:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (842 aa)    
Predicted Functional Partners:
KNG94207.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.950
KNG94206.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.930
KNG93917.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.620
KNG92172.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.620
KNG94210.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.609
KNG94209.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.590
KNG94205.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family.
       0.560
lolD
ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.536
KNG92173.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.536
KNG91860.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.525
Your Current Organism:
Pseudaestuariivita atlantica
NCBI taxonomy Id: 1317121
Other names: Aestuariivita atlantica, Aestuariivita atlantica Li et al. 2015, Aestuariivita sp. 22II-S11-z3, Aestuariivita sp. MCCC 1A09432, KCTC 42276, MCCC 1A09432, P. atlantica, strain 22II-S11-z3
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