STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNG93857.1Dibenzothiophene desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. (295 aa)    
Predicted Functional Partners:
KNG93858.1
(Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
KNG93859.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.992
KNG92383.1
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.879
KNG92815.1
Monoheme cytochrome C SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.866
KNG92818.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.866
KNG92821.1
Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.866
KNG92567.1
NAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.725
KNG93862.1
Sulfoacetaldehyde acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.
 
   
 0.723
KNG93267.1
Ferredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.683
KNG92994.1
Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.573
Your Current Organism:
Pseudaestuariivita atlantica
NCBI taxonomy Id: 1317121
Other names: Aestuariivita atlantica, Aestuariivita atlantica Li et al. 2015, Aestuariivita sp. 22II-S11-z3, Aestuariivita sp. MCCC 1A09432, KCTC 42276, MCCC 1A09432, P. atlantica, strain 22II-S11-z3
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