STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNG93439.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (316 aa)    
Predicted Functional Partners:
KNG93335.1
Cell envelope biogenesis protein OmpA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.880
KNG93389.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.763
KNG92397.1
Phosphoadenosine phosphosulfate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
KNG92505.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.726
KNG95699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.725
KNG94535.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.708
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.
       0.661
KNG92412.1
Gamma-glutamyl kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.646
KNG93180.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.642
KNG94324.1
Hemolysin-type calcium-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.629
Your Current Organism:
Pseudaestuariivita atlantica
NCBI taxonomy Id: 1317121
Other names: Aestuariivita atlantica, Aestuariivita atlantica Li et al. 2015, Aestuariivita sp. 22II-S11-z3, Aestuariivita sp. MCCC 1A09432, KCTC 42276, MCCC 1A09432, P. atlantica, strain 22II-S11-z3
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