STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KNG92625.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)    
Predicted Functional Partners:
KNG92017.1
Cation diffusion facilitator family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.896
KNG92624.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.867
KNG92627.1
Alpha-1,4 polygalactosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.819
KNG92626.1
Threonine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.815
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.736
KNG92714.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.680
KNG95536.1
Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.630
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
  0.546
KNG92623.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.545
KNG94330.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.541
Your Current Organism:
Pseudaestuariivita atlantica
NCBI taxonomy Id: 1317121
Other names: Aestuariivita atlantica, Aestuariivita atlantica Li et al. 2015, Aestuariivita sp. 22II-S11-z3, Aestuariivita sp. MCCC 1A09432, KCTC 42276, MCCC 1A09432, P. atlantica, strain 22II-S11-z3
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