STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORE92358.1HemY domain-containing protein. (504 aa)    
Predicted Functional Partners:
ORE91966.1
COG0408 Coproporphyrinogen III oxidase.
     
 0.816
ORE92360.1
uroporphyrinogen-III synthase.
       0.805
ORE93658.1
Ferrochelatase; COG0276 Protoheme ferro-lyase (ferrochelatase).
     
 0.778
ORE92359.1
Hypothetical protein.
       0.773
ORE93609.1
Hypothetical protein.
  
     0.746
ORE96503.1
Transcriptional regulator protein, MarR family; COG1846 Transcriptional regulators.
  
     0.688
ORE96572.1
SmpA/OmlA.
  
     0.683
ORE93427.1
Hypothetical protein; COG5480 Predicted integral membrane protein.
  
     0.642
ORE94140.1
2'-deoxycytidine 5'-triphosphate deaminase; COG0717 Deoxycytidine deaminase.
  
     0.629
holA
COG1466 DNA polymerase III, delta subunit.
 
     0.625
Your Current Organism:
Stappia sp. 22IIS9Z10
NCBI taxonomy Id: 1317123
Other names: S. sp. 22II-S9-Z10, Stappia sp. 22II-S9-Z10
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