STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORE92596.1LuxR family transcriptional regulator; COG4566 Response regulator. (128 aa)    
Predicted Functional Partners:
ORE90803.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
   
 0.953
ORE95653.1
Two component sensor kinase; COG3920 Signal transduction histidine kinase.
 
 
 0.921
ORE96818.1
COG0642 Signal transduction histidine kinase.
 
 
 0.915
ORE90801.1
Two-component hybrid sensor and regulator; COG2202 FOG: PAS/PAC domain.
 
 
 0.913
ORE94255.1
PAS domain-containing protein; COG2202 FOG: PAS/PAC domain.
 
 
 0.892
ORE95207.1
PAS/PAC sensor hybrid histidine kinase; COG0642 Signal transduction histidine kinase.
 
 
 0.879
ORE94079.1
COG0642 Signal transduction histidine kinase.
 
 
 0.873
ORE94229.1
Nodulation protein V; COG2202 FOG: PAS/PAC domain.
 
 0.873
ORE95336.1
PAS/PAC sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
 
 
 0.847
ORE96309.1
LOV-regulator, Blue-light sensing; COG2202 FOG: PAS/PAC domain.
   
 0.847
Your Current Organism:
Stappia sp. 22IIS9Z10
NCBI taxonomy Id: 1317123
Other names: S. sp. 22II-S9-Z10, Stappia sp. 22II-S9-Z10
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