STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lnt-2Apolipoprotein N-acetyltransferase Lnt; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (525 aa)    
Predicted Functional Partners:
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
   
 0.917
DW2_13425
COG0739 Membrane proteins related to metalloendopeptidases.
 
     0.869
DW2_13430
COG3019 Predicted metal-binding protein.
 
     0.734
DW2_13435
Putative ZIP zinc transporter; COG0428 Predicted divalent heavy-metal cations transporter.
 
     0.730
DW2_13410
COG1651 Protein-disulfide isomerase.
 
     0.660
DW2_13415
COG2847 Uncharacterized protein conserved in bacteria.
 
     0.636
DW2_13405
COG1495 Disulfide bond formation protein DsbB; Belongs to the DsbB family.
 
     0.626
DW2_13385
Hypothetical protein; COG1305 Transglutaminase-like enzymes, putative cysteine proteases.
 
     0.599
DW2_13460
Hypothetical protein.
  
     0.596
DW2_13390
Cation efflux protein; COG1230 Co/Zn/Cd efflux system component.
 
     0.564
Your Current Organism:
Thioclava atlantica
NCBI taxonomy Id: 1317124
Other names: LMG 27145, LMG:27145, MCCC 1A02612, T. atlantica, Thioclava atlantica Lai et al. 2015, Thioclava sp. 13D2W-2, strain 13D2W-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.