Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIT77763.1 | SIT77771.1 | SAMN05444128_0536 | SAMN05444128_0537 | GAF sensor signal transduction histidine kinase. | Cytochrome c oxidase assembly protein subunit 15. | 0.705 |
SIT77763.1 | SIT77777.1 | SAMN05444128_0536 | SAMN05444128_0538 | GAF sensor signal transduction histidine kinase. | Protein of unknown function. | 0.511 |
SIT77771.1 | SIT77763.1 | SAMN05444128_0537 | SAMN05444128_0536 | Cytochrome c oxidase assembly protein subunit 15. | GAF sensor signal transduction histidine kinase. | 0.705 |
SIT77771.1 | SIT77777.1 | SAMN05444128_0537 | SAMN05444128_0538 | Cytochrome c oxidase assembly protein subunit 15. | Protein of unknown function. | 0.565 |
SIT77777.1 | SIT77763.1 | SAMN05444128_0538 | SAMN05444128_0536 | Protein of unknown function. | GAF sensor signal transduction histidine kinase. | 0.511 |
SIT77777.1 | SIT77771.1 | SAMN05444128_0538 | SAMN05444128_0537 | Protein of unknown function. | Cytochrome c oxidase assembly protein subunit 15. | 0.565 |
SIT77777.1 | SIT77784.1 | SAMN05444128_0538 | SAMN05444128_0539 | Protein of unknown function. | Hypothetical protein. | 0.481 |
SIT77777.1 | SIT93456.1 | SAMN05444128_0538 | SAMN05444128_2987 | Protein of unknown function. | Peroxiredoxin Q/BCP. | 0.685 |
SIT77777.1 | SIT95270.1 | SAMN05444128_0538 | SAMN05444128_3993 | Protein of unknown function. | Glycine/D-amino acid oxidase. | 0.422 |
SIT77784.1 | SIT77777.1 | SAMN05444128_0539 | SAMN05444128_0538 | Hypothetical protein. | Protein of unknown function. | 0.481 |
SIT93456.1 | SIT77777.1 | SAMN05444128_2987 | SAMN05444128_0538 | Peroxiredoxin Q/BCP. | Protein of unknown function. | 0.685 |
SIT95270.1 | SIT77777.1 | SAMN05444128_3993 | SAMN05444128_0538 | Glycine/D-amino acid oxidase. | Protein of unknown function. | 0.422 |