STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT78709.1Uncharacterized domain 1-containing protein. (154 aa)    
Predicted Functional Partners:
SIT86097.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 
 0.763
SIT86103.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 
 0.705
SIT92409.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
  0.690
SIT92772.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
  0.670
SIT86092.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
 0.661
SIT78699.1
ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family.
       0.595
menB
1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
    
 0.528
menA
1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
    
 0.527
SIT86108.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.520
SIT85879.1
Phenylacetic acid degradation protein paaN.
  
  
 0.517
Your Current Organism:
Pontibacter indicus
NCBI taxonomy Id: 1317125
Other names: CCM8435, MCC2027, Pontibacter indicus Singh et al. 2014, Pontibacter sp. LP100, strain LP100
Server load: low (14%) [HD]