STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIT94753.1Hypothetical protein. (342 aa)    
Predicted Functional Partners:
SIT94748.1
YtxH-like protein.
  
     0.752
SIT89599.1
Putative Holin-X, holin superfamily III.
  
     0.745
SIT93748.1
Hypothetical protein.
  
     0.741
SIT95143.1
Hypothetical protein.
  
     0.734
SIT83811.1
Hypothetical protein.
  
     0.701
SIT82572.1
Hypothetical protein.
  
     0.692
SIT88756.1
Molecular chaperone IbpA, HSP20 family; Belongs to the small heat shock protein (HSP20) family.
  
     0.669
SIT91727.1
Hypothetical protein.
  
     0.644
SIT74771.1
Hypothetical protein.
  
     0.632
SIT86259.1
Hypothetical protein.
  
     0.627
Your Current Organism:
Pontibacter indicus
NCBI taxonomy Id: 1317125
Other names: CCM8435, MCC2027, Pontibacter indicus Singh et al. 2014, Pontibacter sp. LP100, strain LP100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.