STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGM1_53504Fe-4S ferredoxin iron-sulfur binding domain protein. (68 aa)    
Predicted Functional Partners:
MGM1_5140
Flavodoxin oxidoreductase.
   
 0.999
porA
Pyruvate ferredoxin/flavodoxin oxidoreductase.
  
  
 0.887
MGM1_5320
Putative indolepyruvate ferredoxin oxidoreductase.
  
 
0.843
MGM1_1150
Bifunctional protein: aldehyde and alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 
 0.681
folD
Bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.
     
 0.517
MGM1_4190
Formyltetrahydrofolate synthetase; Belongs to the formate--tetrahydrofolate ligase family.
     
 0.496
pheT
phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
     
 0.464
MGM1_5910
Thioredoxin domain-containing protein; Belongs to the thioredoxin family.
  
  
 0.462
gap
Glyceraladehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.447
dnaK
HSP70 family molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.410
Your Current Organism:
Mycoplasma girerdii
NCBI taxonomy Id: 1318617
Other names: C. Mycoplasma girerdii, Candidatus Mycoplasma girerdii, Mycoplasma sp. VCU_M1
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