Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERT69933.1 | ERT69934.1 | HMPREF0202_00136 | HMPREF0202_00137 | Hypothetical protein; KEGG: cno:NT01CX_0246 6.1e-90 thiD; phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.437 |
ERT69933.1 | thiM | HMPREF0202_00136 | HMPREF0202_00135 | Hypothetical protein; KEGG: cno:NT01CX_0246 6.1e-90 thiD; phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.999 |
ERT69934.1 | ERT69933.1 | HMPREF0202_00137 | HMPREF0202_00136 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; KEGG: cno:NT01CX_0246 6.1e-90 thiD; phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score: 8.96. | 0.437 |
ERT69934.1 | ERT69935.1 | HMPREF0202_00137 | HMPREF0202_00138 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; KEGG: vfi:VF_1156 1.8e-129 chlorohydrolase/deaminase family protein; Psort location: Cytoplasmic, score: 9.97. | 0.547 |
ERT69934.1 | thiM | HMPREF0202_00137 | HMPREF0202_00135 | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | Hypothetical protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.437 |
ERT69935.1 | ERT69934.1 | HMPREF0202_00138 | HMPREF0202_00137 | Hypothetical protein; KEGG: vfi:VF_1156 1.8e-129 chlorohydrolase/deaminase family protein; Psort location: Cytoplasmic, score: 9.97. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.547 |
thiM | ERT69933.1 | HMPREF0202_00135 | HMPREF0202_00136 | Hypothetical protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | Hypothetical protein; KEGG: cno:NT01CX_0246 6.1e-90 thiD; phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; Psort location: Cytoplasmic, score: 8.96. | 0.999 |
thiM | ERT69934.1 | HMPREF0202_00135 | HMPREF0202_00137 | Hypothetical protein; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. | 0.437 |