STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERT69362.1Hypothetical protein. (140 aa)    
Predicted Functional Partners:
nadE
Hypothetical protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
       0.784
ERT69364.1
Hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
       0.783
ERT69361.1
KEGG: elm:ELI_2355 2.8e-05 hypothetical protein; K01265 methionyl aminopeptidase; Psort location: Cytoplasmic, score: 8.96.
       0.773
rsmI
Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.766
ERT69366.1
Hypothetical protein; KEGG: ipo:Ilyop_1713 6.6e-148 C-terminal processing peptidase-3 K03797; Psort location: CytoplasmicMembrane, score: 9.82; Belongs to the peptidase S41A family.
       0.722
ERT69367.1
Hypothetical protein; KEGG: ipo:Ilyop_1714 9.8e-99 hemolysin A; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.722
ERT69368.1
Hypothetical protein; KEGG: hhd:HBHAL_2199 0.0011 yhaM; 3'-5' exoribonuclease YhaM K03698; Psort location: Cytoplasmic, score: 8.96.
       0.722
dxs
Hypothetical protein; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.722
ERT69370.1
Hypothetical protein; KEGG: tpl:TPCCA_0153 1.2e-15 putative phosphatidate phosphatase K09775; Psort location: CytoplasmicMembrane, score: 9.46.
       0.700
ERT69360.1
Hypothetical protein; KEGG: nce:NCER_100357 0.00022 hypothetical protein; K10866 DNA repair protein RAD50; Psort location: Cytoplasmic, score: 8.96.
       0.693
Your Current Organism:
Cetobacterium somerae
NCBI taxonomy Id: 1319815
Other names: C. somerae ATCC BAA-474, Cetobacterium somerae ATCC BAA-474, Cetobacterium somerae CCUG 46254, Cetobacterium somerae WAL 14325
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