STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM13470.1Integral membrane protein. (150 aa)    
Predicted Functional Partners:
GAM13469.1
Amino acid permease.
       0.658
GAM14694.1
Hypothetical protein.
  
     0.529
tlp
Thioredoxin related protein; Belongs to the Tlp family.
  
     0.528
GAM16276.1
YESL protein.
  
     0.515
GAM16569.1
Hypothetical protein; FIG01234419; Belongs to the UPF0736 family.
  
     0.500
GAM12089.1
Hypothetical protein; FIG00673500.
  
     0.476
GAM16622.1
Catalase.
  
     0.442
GAM13468.1
Hypothetical protein.
       0.441
GAM16217.1
Hypothetical protein.
  
     0.435
GAM13375.1
CDS_ID OB0456.
  
     0.420
Your Current Organism:
Bacillus selenatarsenatis
NCBI taxonomy Id: 1321606
Other names: B. selenatarsenatis SF-1, Bacillus selenatarsenatis SF-1, Bacillus sp. SF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.