STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM15053.1Sensor histidine kinase LiaS. (344 aa)    
Predicted Functional Partners:
GAM15054.1
Response regulator LiaR.
 0.992
GAM15793.1
Two component transcriptional regulator VraR.
 0.966
GAM14632.1
DNA-binding response regulator, LuxR family.
  0.907
GAM15052.1
Transporter LiaF.
 
    0.896
GAM15795.1
Transporter associated with VraSR.
 
  
 0.883
GAM14664.1
Transcriptional regulator DegU, LuxR family.
 
  0.873
GAM12004.1
Transcriptional regulator DegU, LuxR family.
 
  0.870
GAM15896.1
DNA-binding response regulator.
 
  0.869
GAM12297.1
Two component transcriptional regulator, LuxR family.
 
  0.868
GAM15473.1
Two component transcriptional regulator, LuxR family.
 
  0.868
Your Current Organism:
Bacillus selenatarsenatis
NCBI taxonomy Id: 1321606
Other names: B. selenatarsenatis SF-1, Bacillus selenatarsenatis SF-1, Bacillus sp. SF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.