STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM15252.1CDS_ID OB3095. (418 aa)    
Predicted Functional Partners:
GAM12037.1
Serine/threonine protein kinase.
  
 
 0.934
GAM14376.1
EAL domain/GGDEF domain protein.
 
 
  0.909
GAM15139.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
0.887
GAM14640.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
0.884
GAM15776.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
0.830
GAM14114.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
0.805
GAM13778.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s).
 
0.787
GAM13549.1
Hypothetical protein.
 
 
0.755
GAM15750.1
Diguanylate phosphodiesterase.
  
 
  0.738
GAM13777.1
Sensory box/GGDEF family protein.
 
 0.737
Your Current Organism:
Bacillus selenatarsenatis
NCBI taxonomy Id: 1321606
Other names: B. selenatarsenatis SF-1, Bacillus selenatarsenatis SF-1, Bacillus sp. SF-1
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