STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAM15917.1TRAP-type C4-dicarboxylate transport system, large permease component. (432 aa)    
Predicted Functional Partners:
GAM15918.1
Tripartite transporter, small subunit.
 
 0.989
GAM13238.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.979
GAM15919.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.966
GAM13239.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 0.926
GAM13235.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
 0.909
GAM16619.1
TRAP transporter, 4TM/12TM fusion protein, unknown substrate 1.
  
  
  0.846
GAM16617.1
TRAP transporter solute receptor, unknown substrate 1.
  
  
  0.789
GAM15655.1
Tricarboxylate transport membrane protein TctA.
  
  
  0.744
GAM15916.1
Esterase/lipase.
       0.727
GAM15653.1
Tricarboxylate transport protein TctC.
  
  
  0.699
Your Current Organism:
Bacillus selenatarsenatis
NCBI taxonomy Id: 1321606
Other names: B. selenatarsenatis SF-1, Bacillus selenatarsenatis SF-1, Bacillus sp. SF-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.