STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598235_00214Unannotated protein. (93 aa)    
Predicted Functional Partners:
GCA_001598235_00213
Unannotated protein.
 
   0.968
GCA_001598235_04342
Unannotated protein.
   
   0.904
GCA_001598235_03001
Unannotated protein.
   
 
 0.796
GCA_001598235_00962
Unannotated protein.
   
 
 0.792
GCA_001598235_00963
Unannotated protein.
   
 
 0.792
GCA_001598235_00977
Unannotated protein.
   
 
 0.792
GCA_001598235_00215
Unannotated protein.
       0.721
GCA_001598235_00216
Unannotated protein.
       0.720
GCA_001598235_04228
Unannotated protein.
 
     0.513
GCA_001598235_00211
Unannotated protein.
       0.477
Your Current Organism:
Polaromonas jejuensis
NCBI taxonomy Id: 1321608
Other names: P. jejuensis NBRC 106434, Polaromonas jejuensis JS12-13, Polaromonas jejuensis NBRC 106434
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