STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598235_01306Unannotated protein. (247 aa)    
Predicted Functional Partners:
GCA_001598235_01307
Unannotated protein.
 
  0.980
GCA_001598235_01308
Unannotated protein.
 
 
  0.970
GCA_001598235_01309
Unannotated protein.
 
  0.966
GCA_001598235_00909
Unannotated protein.
  
  0.939
GCA_001598235_01653
Unannotated protein.
  
  0.939
GCA_001598235_04002
Unannotated protein.
 
  0.922
GCA_001598235_00910
Unannotated protein.
  
 
  0.908
GCA_001598235_01654
Unannotated protein.
  
 
  0.906
GCA_001598235_00866
Unannotated protein.
 
  0.904
GCA_001598235_04003
Unannotated protein.
 
  0.895
Your Current Organism:
Polaromonas jejuensis
NCBI taxonomy Id: 1321608
Other names: P. jejuensis NBRC 106434, Polaromonas jejuensis JS12-13, Polaromonas jejuensis NBRC 106434
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.