STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598235_02872Unannotated protein. (368 aa)    
Predicted Functional Partners:
GCA_001598235_02873
Unannotated protein.
  
  
 0.982
GCA_001598235_01805
Unannotated protein.
  
 0.978
GCA_001598235_01681
Unannotated protein.
  
 0.977
GCA_001598235_03947
Unannotated protein.
  
 0.977
GCA_001598235_02875
Unannotated protein.
  
  
 0.961
GCA_001598235_03159
Unannotated protein.
  
 
 0.959
GCA_001598235_02870
Unannotated protein.
  
  
 0.921
GCA_001598235_04453
Unannotated protein.
  
 0.918
GCA_001598235_03420
Unannotated protein.
   
 0.908
GCA_001598235_01992
Unannotated protein.
     
 0.902
Your Current Organism:
Polaromonas jejuensis
NCBI taxonomy Id: 1321608
Other names: P. jejuensis NBRC 106434, Polaromonas jejuensis JS12-13, Polaromonas jejuensis NBRC 106434
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.