STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH26582.1Hypothetical protein; KEGG: cnc:CNE_1c05590 8.2e-28 ycbB; L,D-transpeptidase YcbB. (494 aa)    
Predicted Functional Partners:
ERH26581.1
Hypothetical protein.
 
     0.901
ERH27620.1
KEGG: aap:NT05HA_0910 8.5e-235 D-alanyl-D-alanine carboxypeptidase/endopeptidase; K07259 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4); Psort location: Periplasmic, score: 9.76.
  
  
  0.581
ERH27988.1
Peptidoglycan amidase MepA; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus.
  
     0.569
ERH26583.1
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.517
ERH26578.1
Transporter, major facilitator family protein; KEGG: asu:Asuc_1765 1.4e-106 putative 3-phenylpropionic acid transporter K05820; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.505
ERH28246.1
D-alanyl-D-alanine carboxypeptidase DacA; KEGG: aan:D7S_01197 5.3e-178 DacC protein; K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Psort location: CytoplasmicMembrane, score: 9.97; Belongs to the peptidase S11 family.
   
 
  0.503
ERH26580.1
Metallo-beta-lactamase domain protein; KEGG: hip:CGSHiEE_03735 1.8e-81 carboxy-terminal protease; Psort location: Cytoplasmic, score: 9.97.
       0.501
ERH27210.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: hiq:CGSHiGG_03050 4.2e-98 thrA; bifunctional aspartokinase I/homoserine dehydrogenase I.
     
  0.499
xerD
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.436
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
       0.436
Your Current Organism:
Aggregatibacter sp. W10330
NCBI taxonomy Id: 1321772
Other names: A. sp. oral taxon 458 str. W10330, Aggregatibacter sp. oral taxon 458 str. W10330
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