STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERH28384.1Peptidoglycan binding domain protein; KEGG: cbt:CLH_2946 5.2e-39 surface protein PspC; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Extracellular, score: 9.72. (512 aa)    
Predicted Functional Partners:
ERH20978.1
Serine protease do-like HtrA family protein; KEGG: bcv:Bcav_3234 4.9e-88 2-alkenal reductase; K08372 putative serine protease PepD; Psort location: CytoplasmicMembrane, score: 9.55.
    
  0.733
guaA
GMP synthase domain protein; Catalyzes the synthesis of GMP from XMP.
    
  0.545
ERH30420.1
Hypothetical protein; KEGG: rcp:RCAP_rcc00167 0.0055 family 2 glycosyl transferase.
  
 
 0.539
ERH24799.1
KEGG: nmh:NMBH4476_1928 2.9e-67 iron chelate ABC transporter, permease protein K02015; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.539
ERH23531.1
Hypothetical protein; KEGG: ase:ACPL_2795 1.1e-07 Serine/threonine-protein kinase MRCK gamma.
  
 
 0.539
ERH32313.1
Chain length determinant protein; KEGG: cwo:Cwoe_5304 1.4e-09 capsular exopolysaccharide family protein.
 
     0.531
ERH26267.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
  
 
   0.527
ERH32617.1
Ricin-type beta-trefoil lectin domain protein; KEGG: tex:Teth514_0757 1.2e-29 dextranase; Psort location: Extracellular, score: 9.72.
  
 
  0.503
ERH26953.1
Hypothetical protein; KEGG: ksk:KSE_26080 4.7e-30 putative ribonuclease; K08300 ribonuclease E; Psort location: Cellwall, score: 9.20.
 
     0.500
ERH30275.1
N-acetylmuramoyl-L-alanine amidase; KEGG: cbe:Cbei_4698 3.1e-47 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cellwall, score: 8.76.
 
 
0.485
Your Current Organism:
Actinomyces sp. F0311
NCBI taxonomy Id: 1321775
Other names: A. sp. oral taxon 172 str. F0311, Actinomyces sp. oral taxon 172 str. F0311
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