STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpsAPutative glycerol-3-phosphate dehydrogenase [NAD(P)+ ]; KEGG: cbi:CLJ_B2749 6.2e-129 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (335 aa)    
Predicted Functional Partners:
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.986
plsY
Putative acyl-phosphate glycerol 3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
 
 
 0.937
ERI91516.1
KEGG: ter:Tery_1973 3.7e-99 8-amino-7-oxononanoate synthase; Psort location: Cytoplasmic, score: 7.50.
  
 0.920
ERI92839.1
Putative FeS-containing Cyanobacterial-specific oxidoreductase; Psort location: Cytoplasmic, score: 7.50.
     
 0.813
ERI89884.1
Hydrogenase maturation GTPase HydF; KEGG: bbd:Belba_2812 3.1e-17 tRNA modification GTPase trmE; K03650 tRNA modification GTPase; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.806
ERI90235.1
PAP2 family protein; KEGG: ctc:CTC02020 3.1e-86 diacylglycerol kinase K00901; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.805
ERI93890.1
Acyltransferase; KEGG: cby:CLM_0495 1.0e-62 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: CytoplasmicMembrane, score: 8.78.
 
  
 0.789
ERI92949.1
Putative ribosomal protein S1; KEGG: cbn:CbC4_1373 2.1e-119 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal protein S1-like protein K02945:K03527; Psort location: Cytoplasmic, score: 9.97.
 
  
 0.762
ERI92613.1
Lipid kinase, YegS/Rv2252/BmrU family; KEGG: cbi:CLJ_B0247 1.8e-115 putative lipid kinase K07029.
     
 0.761
ERI95044.1
Acyltransferase; KEGG: dor:Desor_0590 2.2e-69 1-acyl-sn-glycerol-3-phosphate acyltransferase; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase; Psort location: CytoplasmicMembrane, score: 8.78.
    
 0.758
Your Current Organism:
Clostridiales bacterium F0540
NCBI taxonomy Id: 1321778
Other names: C. bacterium oral taxon 876 str. F0540, Clostridiales bacterium oral taxon 876 str. F0540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.