STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERI92307.1Hypothetical protein. (183 aa)    
Predicted Functional Partners:
ERI92308.1
DNA-directed DNA polymerase; KEGG: clj:CLJU_c03390 1.4e-296 phage related DNA polymerase K02334; Psort location: Cytoplasmic, score: 7.50.
 
     0.904
ERI92310.1
Hypothetical protein.
 
     0.867
ERI92311.1
Virulence-associated protein E; Psort location: Cytoplasmic, score: 7.50.
 
     0.867
ERI92321.1
Hypothetical protein; KEGG: mtr:MTR_1g081590 0.0020 5'-3' exoribonuclease; K12619 5'-3' exoribonuclease 2; Psort location: Cytoplasmic, score: 7.50.
 
     0.797
ERI92278.1
KEGG: dru:Desru_1077 4.4e-183 DNA-directed DNA polymerase; K02334 DNA polymerase bacteriophage-type; Psort location: Cytoplasmic, score: 7.50.
 
     0.788
ERI92287.1
Virulence-associated protein E; Psort location: Cytoplasmic, score: 7.50.
 
     0.788
ERI90320.1
Hypothetical protein; KEGG: asf:SFBM_0104 1.4e-09 DNA-directed DNA polymerase; K02334 DNA polymerase bacteriophage-type; Psort location: Cytoplasmic, score: 7.50.
 
     0.780
ERI92506.1
Phage capsid family protein.
 
     0.773
ERI89945.1
Hypothetical protein; Psort location: Cytoplasmic, score: 7.50.
 
     0.752
ERI89917.1
Resolvase protein; KEGG: apb:SAR116_1288 6.3e-06 Resolvase, N-terminal domain-containing protein; Psort location: Cytoplasmic, score: 7.50.
  
     0.744
Your Current Organism:
Clostridiales bacterium F0540
NCBI taxonomy Id: 1321778
Other names: C. bacterium oral taxon 876 str. F0540, Clostridiales bacterium oral taxon 876 str. F0540
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.