STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERJ85201.1Hypothetical protein. (50 aa)    
Predicted Functional Partners:
ERJ85200.1
Hypothetical protein.
       0.727
ERJ85196.1
Hypothetical protein.
       0.549
ERJ85197.1
KEGG: tmt:Tmath_0146 9.5e-21 DNA polymerase III subunit delta'; K02341 DNA polymerase III subunit delta'; Psort location: Cytoplasmic, score: 8.96.
       0.549
ERJ85198.1
PSP1 protein; KEGG: gka:GK0026 2.0e-82 signal peptidase II; Psort location: Cytoplasmic, score: 8.96.
       0.549
ERJ85199.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.549
ERJ85202.1
Hypothetical protein.
       0.548
ERJ85193.1
Orn/Lys/Arg decarboxylase, major domain protein; KEGG: tmt:Tmath_0142 2.8e-85 Arginine decarboxylase K01582; Psort location: Cytoplasmic, score: 9.97.
       0.532
tmk
dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
       0.532
ERJ85195.1
Hypothetical protein.
       0.532
Your Current Organism:
Peptostreptococcaceae bacterium W5053
NCBI taxonomy Id: 1321784
Other names: P. bacterium oral taxon 113 str. W5053, Peptostreptococcaceae bacterium oral taxon 113 str. W5053
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.