STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000738775_00635Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_000738775_00634
Unannotated protein.
 
     0.888
GCA_000738775_02094
Unannotated protein.
  
 
 0.880
GCA_000738775_02112
Unannotated protein.
  
   0.874
GCA_000738775_01555
Unannotated protein.
   
   0.873
GCA_000738775_01425
Unannotated protein.
   
 
 0.868
GCA_000738775_01544
Unannotated protein.
  
   0.868
GCA_000738775_01525
Unannotated protein.
   
 
 0.865
GCA_000738775_01535
Unannotated protein.
   
   0.863
GCA_000738775_01536
Unannotated protein.
   
   0.863
GCA_000738775_00632
Unannotated protein.
       0.814
Your Current Organism:
Rhodococcus defluvii
NCBI taxonomy Id: 1323361
Other names: DSM 45893, LMG 27563, LMG:27563, R. defluvii, Rhodococcus sp. Ca11, strain Ca11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.