STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000738775_01992Unannotated protein. (343 aa)    
Predicted Functional Partners:
GCA_000738775_01675
Unannotated protein.
  
  
  0.802
GCA_000738775_01991
Unannotated protein.
  
    0.776
GCA_000738775_02141
Unannotated protein.
     
 0.758
GCA_000738775_00020
Unannotated protein.
   
  0.757
GCA_000738775_01364
Unannotated protein.
   
  0.757
GCA_000738775_02140
Unannotated protein.
     
 0.757
GCA_000738775_02142
Unannotated protein.
     
 0.756
GCA_000738775_02145
Unannotated protein.
     
 0.755
GCA_000738775_02139
Unannotated protein.
     
 0.753
GCA_000738775_01843
Unannotated protein.
  
 
 0.747
Your Current Organism:
Rhodococcus defluvii
NCBI taxonomy Id: 1323361
Other names: DSM 45893, LMG 27563, LMG:27563, R. defluvii, Rhodococcus sp. Ca11, strain Ca11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.