STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001730685_01919Unannotated protein. (94 aa)    
Predicted Functional Partners:
GCA_001730685_01918
Unannotated protein.
       0.715
GCA_001730685_01920
Unannotated protein.
  
    0.713
GCA_001730685_00610
Unannotated protein.
  
     0.704
GCA_001730685_01917
Unannotated protein.
       0.700
GCA_001730685_02084
Unannotated protein.
  
     0.661
GCA_001730685_02231
Unannotated protein.
  
     0.645
GCA_001730685_01916
Unannotated protein.
       0.641
GCA_001730685_01909
Unannotated protein.
  
     0.637
GCA_001730685_00607
Unannotated protein.
  
     0.569
GCA_001730685_01660
Unannotated protein.
  
     0.560
Your Current Organism:
Caloranaerobacter ferrireducens
NCBI taxonomy Id: 1323370
Other names: C. ferrireducens, Caloranaerobacter ferrireducens Zeng et al. 2015, Caloranaerobacter sp. DY22619, DSM 27799, JCM 19467, MCCC1A06455, strain DY22619
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.