STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPA78378.1Stage II sporulation protein P; Derived by automated computational analysis using gene prediction method: Protein Homology. (414 aa)    
Predicted Functional Partners:
gpr
GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
 
    0.935
OPA75733.1
Stage II sporulation protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.830
OPA81433.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
 
   
 0.814
OPA73178.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.808
OPA81337.1
Stage III sporulation protein AG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.802
OPA78410.1
Sporulation protein YqfD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.801
OPA81352.1
SpoIVB peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.799
OPA73183.1
Sporulation protein YabP; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.793
OPA81333.1
Stage III sporulation protein AC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.790
OPA81335.1
Stage III sporulation protein AE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.786
Your Current Organism:
Paenibacillus selenitireducens
NCBI taxonomy Id: 1324314
Other names: CCTCC AB2013097, KCTC 33157, P. selenitireducens, Paenibacillus selenitireducens Yao et al. 2014, Paenibacillus sp. ES3-24, strain ES3-24
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