STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OPA73629.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (551 aa)    
Predicted Functional Partners:
OPA73406.1
EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
OPA77566.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.488
OPA73630.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.447
OPA79483.1
Aspartate 4-decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.437
OPA73628.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.422
OPA73428.1
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.420
OPA77567.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
OPA74040.1
DUF4367 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.403
Your Current Organism:
Paenibacillus selenitireducens
NCBI taxonomy Id: 1324314
Other names: CCTCC AB2013097, KCTC 33157, P. selenitireducens, Paenibacillus selenitireducens Yao et al. 2014, Paenibacillus sp. ES3-24, strain ES3-24
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.