STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKK73294.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (192 aa)    
Predicted Functional Partners:
AKK73293.1
Divergent 4Fe-4S mono-cluster; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
AKK74922.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.782
AKK73295.1
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
AKK73292.1
Osmotically inducible protein OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AKK73296.1
Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.
 
     0.749
AKK73297.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
AKK73291.1
Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.512
Your Current Organism:
Chryseobacterium gallinarum
NCBI taxonomy Id: 1324352
Other names: C. gallinarum, CCM 8493, Chryseobacterium gallinarum Kampfer et al. 2014 emend. Hahnke et al. 2016, Chryseobacterium sp. 100, DSM 27622, LMG 27808, LMG:27808, strain 100
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.