Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
R4FNT4_RHOPR | R4G538_RHOPR | R4FNT4 | R4G538 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Putative ubiquitin/ribosomal protein. | 0.573 |
R4FNT4_RHOPR | T1H7P2_RHOPR | R4FNT4 | T1H7P2 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Uncharacterized protein. | 0.435 |
R4FNT4_RHOPR | T1H9W4_RHOPR | R4FNT4 | T1H9W4 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Uncharacterized protein. | 0.435 |
R4FNT4_RHOPR | T1HFI2_RHOPR | R4FNT4 | T1HFI2 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Myb-like domain-containing protein. | 0.985 |
R4FNT4_RHOPR | T1I428_RHOPR | R4FNT4 | T1I428 | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | Uncharacterized protein. | 0.841 |
R4G538_RHOPR | R4FNT4_RHOPR | R4G538 | R4FNT4 | Putative ubiquitin/ribosomal protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | 0.573 |
R4G538_RHOPR | R4G7P9_RHOPR | R4G538 | R4G7P9 | Putative ubiquitin/ribosomal protein. | Uncharacterized protein. | 0.731 |
R4G538_RHOPR | T1H7P2_RHOPR | R4G538 | T1H7P2 | Putative ubiquitin/ribosomal protein. | Uncharacterized protein. | 0.425 |
R4G538_RHOPR | T1H9W4_RHOPR | R4G538 | T1H9W4 | Putative ubiquitin/ribosomal protein. | Uncharacterized protein. | 0.425 |
R4G538_RHOPR | T1HFI2_RHOPR | R4G538 | T1HFI2 | Putative ubiquitin/ribosomal protein. | Myb-like domain-containing protein. | 0.703 |
R4G538_RHOPR | T1HIN4_RHOPR | R4G538 | T1HIN4 | Putative ubiquitin/ribosomal protein. | Uncharacterized protein. | 0.990 |
R4G538_RHOPR | T1I0U2_RHOPR | R4G538 | T1I0U2 | Putative ubiquitin/ribosomal protein. | Uncharacterized protein. | 0.644 |
R4G538_RHOPR | T1I428_RHOPR | R4G538 | T1I428 | Putative ubiquitin/ribosomal protein. | Uncharacterized protein. | 0.660 |
R4G7P9_RHOPR | R4G538_RHOPR | R4G7P9 | R4G538 | Uncharacterized protein. | Putative ubiquitin/ribosomal protein. | 0.731 |
R4G7P9_RHOPR | T1H7P2_RHOPR | R4G7P9 | T1H7P2 | Uncharacterized protein. | Uncharacterized protein. | 0.454 |
R4G7P9_RHOPR | T1H9W4_RHOPR | R4G7P9 | T1H9W4 | Uncharacterized protein. | Uncharacterized protein. | 0.454 |
R4G7P9_RHOPR | T1I0U2_RHOPR | R4G7P9 | T1I0U2 | Uncharacterized protein. | Uncharacterized protein. | 0.889 |
R4G8T2_RHOPR | T1H7P2_RHOPR | R4G8T2 | T1H7P2 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.425 |
R4G8T2_RHOPR | T1H9W4_RHOPR | R4G8T2 | T1H9W4 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.425 |
R4G8T2_RHOPR | T1HFI2_RHOPR | R4G8T2 | T1HFI2 | RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Myb-like domain-containing protein. | 0.667 |
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