STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1HHD8_RHOPRc-SKI_SMAD_bind domain-containing protein. (225 aa)    
Predicted Functional Partners:
R4FPF1_RHOPR
Ubiquitin-like protein.
 
      0.822
T1HQP4_RHOPR
Uncharacterized protein.
      
 0.539
R4FL16_RHOPR
Putative nedd8 also known as rub1 has a single conserved ubiquitin-like protein.
      
 0.538
T1HLH5_RHOPR
Uncharacterized protein.
      
 0.537
R4FMI5_RHOPR
Putative ubiquitin-like protein.
      
 0.536
T1HVL2_RHOPR
ATP-dependent Clp protease proteolytic subunit.
      
 0.524
T1IDR9_RHOPR
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
      
 0.522
T1HPS6_RHOPR
BTB domain-containing protein.
      
 0.506
T1IDJ7_RHOPR
Small ubiquitin-related modifier.
      
 0.493
R4FNU1_RHOPR
Autophagy protein 5; Involved in autophagic vesicle formation.
      
 0.473
Your Current Organism:
Rhodnius prolixus
NCBI taxonomy Id: 13249
Other names: R. prolixus
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