T1HTD4_RHOPR protein (Rhodnius prolixus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1HTD4_RHOPR

Cytochrome P450 (CYP4Q). (183 aa)

Predicted Functional Partners:

T1I4V4_RHOPR

0.689

T1HYT2_RHOPR

0.631

R4G421_RHOPR

0.604

T1H9K9_RHOPR

0.604

R4G8J7_RHOPR

0.588

T1H934_RHOPR

0.548

T1HSS8_RHOPR

0.535

T1HU58_RHOPR

0.535

T1HZL8_RHOPR

0.535

T1HP85_RHOPR

0.517

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
R4G421_RHOPR	T1H9K9_RHOPR	R4G421	T1H9K9	Putative nucleic acid-binding protein asmtl.	Uncharacterized protein.	0.941
R4G421_RHOPR	T1HTD4_RHOPR	R4G421	T1HTD4	Putative nucleic acid-binding protein asmtl.	Cytochrome P450 (CYP4Q).	0.604
R4G421_RHOPR	T1I4V4_RHOPR	R4G421	T1I4V4	Putative nucleic acid-binding protein asmtl.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.616
R4G8J7_RHOPR	T1H934_RHOPR	R4G8J7	T1H934	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	AMP-binding domain-containing protein.	0.989
R4G8J7_RHOPR	T1HSS8_RHOPR	R4G8J7	T1HSS8	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Carrier domain-containing protein.	0.989
R4G8J7_RHOPR	T1HTD4_RHOPR	R4G8J7	T1HTD4	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Cytochrome P450 (CYP4Q).	0.588
R4G8J7_RHOPR	T1HU58_RHOPR	R4G8J7	T1HU58	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	AMP-binding domain-containing protein.	0.989
R4G8J7_RHOPR	T1HYT2_RHOPR	R4G8J7	T1HYT2	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Uncharacterized protein.	0.594
R4G8J7_RHOPR	T1HZL8_RHOPR	R4G8J7	T1HZL8	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Carrier domain-containing protein.	0.989
T1H934_RHOPR	R4G8J7_RHOPR	T1H934	R4G8J7	AMP-binding domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.989
T1H934_RHOPR	T1HTD4_RHOPR	T1H934	T1HTD4	AMP-binding domain-containing protein.	Cytochrome P450 (CYP4Q).	0.548
T1H934_RHOPR	T1I4V4_RHOPR	T1H934	T1I4V4	AMP-binding domain-containing protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.579
T1H9K9_RHOPR	R4G421_RHOPR	T1H9K9	R4G421	Uncharacterized protein.	Putative nucleic acid-binding protein asmtl.	0.941
T1H9K9_RHOPR	T1HTD4_RHOPR	T1H9K9	T1HTD4	Uncharacterized protein.	Cytochrome P450 (CYP4Q).	0.604
T1H9K9_RHOPR	T1I4V4_RHOPR	T1H9K9	T1I4V4	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.	0.616
T1HP85_RHOPR	T1HTD4_RHOPR	T1HP85	T1HTD4	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Cytochrome P450 (CYP4Q).	0.517
T1HP85_RHOPR	T1HYT2_RHOPR	T1HP85	T1HYT2	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.	Uncharacterized protein.	0.573
T1HSS8_RHOPR	R4G8J7_RHOPR	T1HSS8	R4G8J7	Carrier domain-containing protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.989
T1HSS8_RHOPR	T1HTD4_RHOPR	T1HSS8	T1HTD4	Carrier domain-containing protein.	Cytochrome P450 (CYP4Q).	0.535
T1HTD4_RHOPR	R4G421_RHOPR	T1HTD4	R4G421	Cytochrome P450 (CYP4Q).	Putative nucleic acid-binding protein asmtl.	0.604