STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1HU72_RHOPRCCHC-type domain-containing protein. (115 aa)    
Predicted Functional Partners:
T1IFS6_RHOPR
RRM domain-containing protein.
   
 
 0.898
T1HZ74_RHOPR
KH_dom_type_1 domain-containing protein.
   
 
 0.763
T1HQI8_RHOPR
Uncharacterized protein.
    
 0.608
R4FLW3_RHOPR
Putative splicing factor.
     
 0.525
T1HEC7_RHOPR
RRM domain-containing protein.
   
 
 0.519
T1HYE7_RHOPR
Uncharacterized protein.
   
 
 0.487
R4G8K3_RHOPR
U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family.
    
 
 0.479
R4G3U4_RHOPR
Putative methyl-cpg binding transcription regulator.
     
 0.450
T1HDK7_RHOPR
MBD domain-containing protein.
     
 0.450
R4FQC3_RHOPR
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.422
Your Current Organism:
Rhodnius prolixus
NCBI taxonomy Id: 13249
Other names: R. prolixus
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.