T1HW04_RHOPR protein (Rhodnius prolixus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

T1HW04_RHOPR

Sema domain-containing protein. (1903 aa)

Predicted Functional Partners:

T1I3T8_RHOPR

0.964

T1HSF9_RHOPR

0.910

T1HS95_RHOPR

0.899

T1I2F1_RHOPR

0.889

T1HE62_RHOPR

0.887

T1ICJ1_RHOPR

0.887

T1HZ35_RHOPR

0.884

T1HCG7_RHOPR

0.818

T1HS40_RHOPR

0.799

T1HIN4_RHOPR

0.797

Your Current Organism:

Rhodnius prolixus

NCBI taxonomy Id: 13249
Other names: R. prolixus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
T1HCG7_RHOPR	T1HIN4_RHOPR	T1HCG7	T1HIN4	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.671
T1HCG7_RHOPR	T1HS40_RHOPR	T1HCG7	T1HS40	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Receptor protein-tyrosine kinase.	0.812
T1HCG7_RHOPR	T1HW04_RHOPR	T1HCG7	T1HW04	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Sema domain-containing protein.	0.818
T1HCG7_RHOPR	T1HZ35_RHOPR	T1HCG7	T1HZ35	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Tyrosine-protein kinase otk.	0.746
T1HE62_RHOPR	T1HS40_RHOPR	T1HE62	T1HS40	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.610
T1HE62_RHOPR	T1HSF9_RHOPR	T1HE62	T1HSF9	Uncharacterized protein.	Sema domain-containing protein.	0.579
T1HE62_RHOPR	T1HW04_RHOPR	T1HE62	T1HW04	Uncharacterized protein.	Sema domain-containing protein.	0.887
T1HE62_RHOPR	T1HZ35_RHOPR	T1HE62	T1HZ35	Uncharacterized protein.	Tyrosine-protein kinase otk.	0.629
T1HE62_RHOPR	T1I2F1_RHOPR	T1HE62	T1I2F1	Uncharacterized protein.	Sema domain-containing protein; Belongs to the semaphorin family.	0.778
T1HIN4_RHOPR	T1HCG7_RHOPR	T1HIN4	T1HCG7	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.671
T1HIN4_RHOPR	T1HS40_RHOPR	T1HIN4	T1HS40	Uncharacterized protein.	Receptor protein-tyrosine kinase.	0.976
T1HIN4_RHOPR	T1HW04_RHOPR	T1HIN4	T1HW04	Uncharacterized protein.	Sema domain-containing protein.	0.797
T1HIN4_RHOPR	T1HZ35_RHOPR	T1HIN4	T1HZ35	Uncharacterized protein.	Tyrosine-protein kinase otk.	0.998
T1HIN4_RHOPR	T1I3T8_RHOPR	T1HIN4	T1I3T8	Uncharacterized protein.	Uncharacterized protein.	0.911
T1HS40_RHOPR	T1HCG7_RHOPR	T1HS40	T1HCG7	Receptor protein-tyrosine kinase.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.812
T1HS40_RHOPR	T1HE62_RHOPR	T1HS40	T1HE62	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.610
T1HS40_RHOPR	T1HIN4_RHOPR	T1HS40	T1HIN4	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.976
T1HS40_RHOPR	T1HS95_RHOPR	T1HS40	T1HS95	Receptor protein-tyrosine kinase.	Uncharacterized protein.	0.610
T1HS40_RHOPR	T1HSF9_RHOPR	T1HS40	T1HSF9	Receptor protein-tyrosine kinase.	Sema domain-containing protein.	0.610
T1HS40_RHOPR	T1HW04_RHOPR	T1HS40	T1HW04	Receptor protein-tyrosine kinase.	Sema domain-containing protein.	0.799